Mammalian prolactin (mature protein) alignment

A comparison of prolactin sequences with the sequence derived for the 'ancestral placental mammal (a.p.m)' is shown below the first alignment. * indicates gap. B/b = Asp or Asn; Z/z = Glu or Gln.

                        10        20         30        40         50        60
Human           LPICPGGAARCQVTLRDLFD RAVVLSHYIHNLSSEMFSEF DKRYTHGRGFITKAINSCHT
Chimpanzee      LPICPGGAARCQVTLGDLFD RAVVLSHYIHNLSSEMFSEF DKRYTHGRGFITKAINSCHT
Rhesus monkey   LPICPGGAARCQVTLRDLFD RAVVLSHYIHNLSSEMFSEF DKRYTHGRGFITRAINSCHT
Baboon          LPICPGGAARCQVTLRDLFD RAVVLSHYIHNLSSEMFSEF DKQYTHGRGFITRAINSCHT
Marmoset        LPVCPGGAVRCQVTLRDLFD RAVVLSHYIHNLSSEMFSEF DKRYTQGRGFISKALNSCHT 
SlowLoris       LPICPGGAANCQVSLRDLFD RAVILSHYIHNLSSEMFNEF DKRYAQGRGFITKAINSCHT
Horse           LPICPSGAVNCQVSLRELFD RAVILSHYIHNLSSEMFNEF DKRYAQGRGFVTKAINSCHT
Pig             LPICPSGAVNCQMSLRDLFD RAVILSHYIHNLSSEMFNEF DKRYAQGRGFITKAINSCHT
Camel           LPICPSGAVNCQVSLRDLFD RAVILSHYIHNLSSEMFNEF DKRYAQGRGFMTKAINSCHT
Sheep           TPVCPNGPGDCQVSLRDLFD RAVMVSHYIHNLSSEMFNEF DKRYAQGKGFITMALNSCHT
Goat            TPVCPNGPGNCQVSLRDLFD RAVMVSHYIHNLSSEMFNEF DKRYAQGKGYITMALNSCHT
Ox              TPVCPNGPGNCQVSLRDLFD RAVMVSHYIHDLSSEMFNEF DKRYAQGKGFITMALNSCHT
Fin whale       LPICPSGAVNCQVSLRDLFD RAVILSHYIHNLSSEMFNEF DKRYAQGRGFITKAIBSCHT
Sei whale       LPICPSGAVNCQVSLRDLFD RAVILSHYIHNLSSEMFNEF DKRYAQGRGFITKAIDSCHT
Elephant        IPVCPRGSVRCQVSLPDLFD RAVMLSHYIHSLSSDMFHEF NKQYALGRGFIPRAINSCHT
Dog             LPICPSGAVNCQVSLRDLFD RAVILSHYIHNLSSEMFNEF DKRYAQGRGFITKAINSCHT
Cat             LPICPSGAVNCQVSLRDLFD RAVILSHYIHNLSSEMFNEF DKRYAQGRGFITKAINSCHT
Mink                  GAVNCQVSLRDLFD RAVILSHYIHNLSSEMFNEF DKRYAhGRGFITKAINSCHT
Rabbit          LPICPSGAVNCQVSLRDLFD RAVILSHHIHKLSSEMFNEF DKRYTQGRGFITKAINSCHT
Hamster         LPICPGG**NCQMPLQELFD RVIMLSHYIYMLSADMFIEL DKQYAQDHEFIAKAISDCPT
Rat             LPVCSGG**DCQTPLPELFD RVVMLSHYIHTLYTDMFIEF DKQYVQDREFIAKAINDCPT
Mouse           LPICSAG**DCQTSLRELFD RVVILSHYIHTLYTDMFIEF DKQYVQDREFMVKVINDCPT

a.p.m.          LPICPSGAVNCQVSLRDLFD RAVILSHYIHNLSSEMFNEF DKRYAQGRGFITKAINSCHT

BrTailPossum    LPICPSGAVNCQVSLSDLFD RAVMLSHYIHSPSSEMFNEF DERYAQGRGFITKAINSCHT
Monodelphis     LPICPSGAVNCQVSLSDLFD RAVMLSHYIHSPSSEMFNEF DERYAQGRGFITKAINSCHT


                        70        80         90       100        110       120
Human           SSLATPEDKEQAQQMNQKDF LSLIVSILRSWNEPLYHLVT EVRGMQEAPEAILSKAVEIE
Chimpanzee      SSLATPEDKEQAQQINQKDF LSLIVSILRSWNEPLYHLVT EVRGMQEAPEAILSKAVEIE
Rhesus monkey   SSLPTPEDKEQAQQMNQKDF LSLIVSILRSWNEPLYHLVT EVRGMEEAPEAILSKAVEIE
Baboon          SSLPTPEDKEQAQQINQKDF LSLIVSILRSWNEPLYHLVT EVRGMEEAPEAILSKAVEIE
Marmoset        SSLATPEDKEQAQQISQKDF LSLIVSILRSWNEPLYHLVT EVRGMQEAPEAILSKAIEIE
SlowLoris       SSLSTPEDKEQAQQIHHEDL LNLVLRVLRSWNDPLYHLVT EVRGMQEAPDAILSRAIEIE
Horse           SSLSTPEDKEQAQQIHHEDL LNLILRVLKSWNDPLYHLVS EVRGMQEAPEAILSKAIEIE
Pig             SSLSTPEDKEQAQQIHHEVL LNLILRVLRSWNDPLYHLVT EVRGMQEAPDAILSRAIEIE
Camel           SSLSTPEDKEQAQQIHHEDL LNLVLRVLRSWNDPLYHLVT EVRGMQEAPDAILSRAIEIE
Sheep           SSLPTPEDKEQAQQTHHEVL MSLILGLLRSWNDPLYHLVT EVRGMKGVPDAILSRAIEIE
Goat            SSLPTPEDKEQAQQTHHEVL MSLILGLLRSWNDPLYHLVT EVRGMKGVPDAILSRAIEIE
Ox              SSLPTPEDKEQAQQTHHEVL MSLILGLLRSWNDPLYHLVT EVRGMKGAPDAILSRAIEIE
Fin whale       SSLSTPZBKEZAZZSHHEVL VSLILGVLRSWBBPLYHLVT ZVRGMQEAPDAILSRAIEIE
Sei whale       SSLQTPEDKEQAQZIHHEVL VSLILGVLRSWNBPLYHLVT EVRGMQEAPDAILSRAIQIE
Elephant        SSISTPEDKDQAQQTHHEVL MDLILGLLRSWNDPLDHLAS EVHSLPKAPSALLTKATEVK
Dog             SSLSTPEDKEQAQQIHHEDL LNLILRVLRSWNDPLYHLVT EVRGMQEAPDAILSRAIEIE
Cat             SSLPTPEDKEQAQQIHHEDL LNVILRVLRSWNDPLYHLVT EVRGLHEAPDAILSRAIEIE
Mink            SSLSTPEDKEQAQQIHHEDL LNLILRVLRSWNDPLYHLVS EVRGMQEAPDSILSRAIEIE
Rabbit          SSLSTPEDKEQAQQIHHEDL LNMVLRVLPSWNDPLYHLVT EVRGMQEAPDAILSKAIEIE
Hamster         SSLATPEGKEEAQQVPPEVL LNLILSLVHSWNDPLFQLVT EVDGIHEASDAIISRAKEIG
Rat             SSLATPEDKEQAQKVPPEVL LNLILSLVHSWNDPLFQLIT GLGGIHEAPDAIISRAKEIE
Mouse           SSLATPEDKEQALKVPPEVL LNLILSLVQSSSDPLFQLIT GVGGIQEAPEYILSRAKEIE

a.p.m.          SSLSTPEDKEQAQQIHHEDL LNLILRVLRSWNDPLYHLVT EVRGMQEAPDAILSKAIEIE

BrTailPossum    SSLSTPEDKEQAQQIHHEDL LNLILRVLRSWNDPLYHLVT EVRSMQEAPDTILSKAMEIE
Monodelphis     SSLSTPEDKEQAQQIRHEDL LNLVLRVLRSWSEPLYHLVT EVRSMQEAPDTILLKAMEIE


                       130       140        150       160        170       180
Human           EQTKRLLEGMELIVSQVHPE TKENEIYPVWSGLPSLQMAD EESRLSAYYNLLHCLRRDSH
Chimpanzee      EQTKRLLEGMELIVSQVHPE TKENEIYPVWSGLPSLQMAD EESRLSAYYNLLHCLRRDSH
Rhesus monkey   EQTKRLLEGMELIVSQVHPE TKENEIYPVWTGLPSLQMAD EESRLSAYYNLLHCLRRDSH
Baboon          EQTKRLLEGMELIVSQVHPE TKENEIYPVWTGLPSLGMAD EESRLSAYYNLLHCLRRDSH
Marmoset        EQSKRLLEGMELILSQVHPE TRENAVYSVWSGLPSLQMAD EESRLFAYYNLLHCLRRDSH   
SlowLoris       EQNKRLLEGMEKIVGQVHPR IRENEVYSVWSGLPALQMAD EDSRLFAFYNLLHCLRRDSH
Horse           EQNRRLLEGMEKIVGQVQPR IKENEVYSVWSGLPSLQMAD EDSRLFAFYNLLHCLRRDSH
Pig             EQNKRLLEGMEKIVGQVHPG IKENEVYSVWSGLPSLQMAD EDTRLFAFYNLLHCLRRDSH
Camel           EQNKRLLEGMEKIVGQVHPG VKENEIYSVWSGLPSLQMAD EDTRLFAFYNLLHCLRRDSH
Sheep           EENKRLLEGMEMIFGQVIPG AKETEPYPVWSGLPSLQTKD EDARHSAFYNLLHCLRRDSS
Goat            EENKRLLEGMEMILGQVIPG AKETEPYPVWSGLPSLQTKD EEARHSAFYNLLHCLRRDSS
Ox              EENKRLLEGMEMIFGQVIPG AKETEPYPVWSGLPSLQTKD EDARYSAFYNLLHCLRRDSS
Fin whale       EQNKRLLEGMEKIVGQVHPG VKENEVYSVWSGLPSLQMAD EDTRLFAFYNLLHCLRRDSH
Sei whale       EENKRLLEGMEKIVGQVHPG VKENEVYSVWSGLPSLQMAD EDTRLFAFYDLLHCLRRDSH
Elephant        EENQRLLEGIEKIVDQVHPG AKENKAYSVWSGLPSLQTTD EDARLFAFYNLFRCLRRDSH
Dog             EQNRRLLEGMEKIVGQVHPG IRENEVYSVWSGLPSLQMAD EDTRLFAFYNLLHCLRRDSH
Cat             EQNRRLLEGMEKIVHQVHPG VRENEVYSVWSGLPSLQMAD EDSRLFAFYNLLHCLRRDSH
Mink            EQNRRLLEGMEKIVGQVHPG VRENEVYSVWSGLPSLQMAe EDSRLFAFYNLLHCLRRDSH
Rabbit          EQNRRLLEGMEKIVGQVHPG IKENEIYSVWSGLPSLQMAD EDARLFAFYNLLHCLRRDSH
Hamster         EQNKRLLEGIEKILGQAYPE AKGNEIYSVWSQFPSLQGVD EESRDLAIYNKVRCLRRDSH
Rat             EQNKRLLEGIEKIISQAYPE AKGNEIYLVWSQLPSLQGVD EESKDLAFYNNIRCLRRDSH
Mouse           EQNKRLLEGIEKIISQAYPE AKGNGIYFVWSQLPSLQGVD EESKILSLRNTIRCLRRDSH


a.p.m.          EQNKRLLEGMEKIVGQVHPG IKENEVYSVWSGLPSLQMAD EDSRLFAFYNLLHCLRRDSH

BrTailPossum    EQNKRLLEGMEKIVGQVHPG DRENEVYSVWSGLPSLQMAD EDTRLFAFYNLLHCLRRDSH
Monodelphis     EQNKRLLEGMEKIVGQVHPG DRENEVYSVWSGLPSLQMAD EDTRLFAFYNLLHCLRRDSH

                       190      199
Human           KIDNYLKLLKCRIIHNNNC
Chimpanzee      KIDNYLKLLKCRIIHNNNC
Rhesus monkey   KIDNYLKLLKCRIIHNNNC
Baboon          KIDNYLKLLKCRIIHNNNC
Marmoset        KIDNYLKLLKCRIIHDNNC
SlowLoris       KIDNYLKLLKCRIIYDSNC
Horse           KIDNYLKLLKCRIVYDSNC
Pig             KIDNYLKLLKCRIIYDSNC
Camel           KIDNYLKLLKCRIIYDSNC
Sheep           KIDTYLKLLNCRIIYNNNC
Goat            KIDTYLKLLNCRIIYNNNC
Ox              KIDTYLKLLNCRIIYNNNC
Fin whale       KIDNYLKLLKCRIIYDSNC
Sei whale       KIDSYLKLLKCRIIYNSNC
Elephant        KIDSYLKLLKCRIVYNNNC
Dog             KIDNYLKLLKCRIVYDSNC
Cat             KIDSYLKLLKCRIVYDSNC
Mink            KIDNYLKLLKCRIVYhSNC
Rabbit          KIDNYLKLLKCRIIYDSNC
Hamster         KVDNYLKLLRCRVVHNNNC
Rat             KVDNYLKFLRCQIVHKNNC
Mouse           KVDNYLKVLRCQIAHQNNC


a.p.m.          KIDNYLKLLKCRIIYDSNC

BrTailPossum    KIDNYLKLLKCRLIHDSNC
Monodelphis     KIDNYLKLLKCRLIHDSNC


A sequence was predicted for the prolactin of the ancestral placental mammal (a.p.m.) by making the simplifying assumption that all eutherian mammalian orders diverged at the same point in evolutionary time. The following alignment shows differences between extant sequences and this ancestral one (- indicates identity, * indicates gap):

                                                       
                        10        20         30        40         50        60
Human           -----G--AR---T------ ---V-------------S-- ----TH--------------
Chimpanzee      -----G--AR---T-G---- ---V-------------S-- ----TH--------------
Rhesus monkey   -----G--AR---T------ ---V-------------S-- ----TH------R-------
Baboon          -----G--AR---T------ ---V-------------S-- --Q-TH------R-------
Marmoset        --V--G---R---T------ ---V-------------S-- ----T------S--L----- 
SlowLoris       -----G--A----------- -------------------- --------------------
Horse           ----------------E--- -------------------- ----------V---------
Pig             ------------M------- -------------------- --------------------
Camel           -------------------- -------------------- ----------M---------
Sheep           T-V--N-PGD---------- ---MV--------------- -------K----M-L-----
Goat            T-V--N-PG----------- ---MV--------------- -------K-Y--M-L-----
Ox              T-V--N-PG----------- ---MV-----D--------- -------K----M-L-----
Fin whale       -------------------- -------------------- ---------------b----
Sei whale       -------------------- -------------------- ---------------D----
Elephant        I-V--R-S-R-----P---- ---M------S---D--H-- N-Q--L-----PR-------
Dog             -------------------- -------------------- --------------------
Cat             -------------------- -------------------- --------------------
Mink                  -------------- -------------------- -----h--------------
Rabbit          -------------------- -------H--K--------- ----T---------------
Hamster         -----G-**---MP-QE--- -VIM-----YM--AD--I-L --Q---DHE--A---SD-P-
Rat             --V-SG-**D--TP-PE--- -V-M------T-YTD--I-- --Q-V-D-E--A----D-P-
Mouse           ----SA-**D--T---E--- -V--------T-YTD--I-- --Q-V-D-E-MV-V--D-P-

a.p.m.          LPICPSGAVNCQVSLRDLFD RAVILSHYIHNLSSEMFNEF DKRYAQGRGFITKAINSCHT

BrTailPossum    ---------------S---- ---M------SP-------- -E------------------
Monodelphis     ---------------S---- ---M------SP-------- -E------------------


                        70        80         90       100        110       120
Human           ---A----------MNQK-F -S--VSI-----E------- ---------E------V---
Chimpanzee      ---A-----------NQK-F -S--VSI-----E------- ---------E------V---
Rhesus monkey   ---P----------MNQK-F -S--VSI-----E------- -----E---E------V---
Baboon          ---P-----------NQK-F -S--VSI-----E------- -----E---E------V---
Marmoset        ---A-----------SQK-F -S--VSI-----E------- ---------E----------
SlowLoris       -------------------- ---V---------------- --------------R-----
Horse           -------------------- --------K----------S ---------E----------
Pig             ------------------V- -------------------- --------------R-----
Camel           -------------------- ---V---------------- --------------R-----
Sheep           ---P----------T---V- MS---GL------------- -----KGV------R-----
Goat            ---P----------T---V- MS---GL------------- -----KGV------R-----
Ox              ---P----------T---V- MS---GL------------- -----KG-------R-----
Fin whale       ------zb--z-zzS---V- VS---G-----bb------- z-------------R-----
Sei whale       ---Q---------z----V- VS---G------b------- --------------R--Q--
Elephant        --I------D----T---V- MD---GL--------D--AS --HSLPK--S-L-T--T-VK
Dog             -------------------- -------------------- --------------R-----
Cat             ---P---------------- --V----------------- ----LH--------R-----
Mink            -------------------- -------------------S ----------S---R-----
Rabbit          -------------------- --MV----P----------- --------------------
Hamster         ---A---G--E---VPP-V- -----SLVH------FQ--- --D-IH--S---I-R-K--G
Rat             ---A---------KVPP-V- -----SLVH------FQ-I- GLG-IH------I-R-K---
Mouse           ---A--------LKVPP-V- -----SLVQ-SS---FQ-I- G-G-I----EY---R-K---

a.p.m.          SSLSTPEDKEQAQQIHHEDL LNLILRVLRSWNDPLYHLVT EVRGMQEAPDAILSKAIEIE

BrTailPossum    -------------------- -------------------- ---S------T-----M---
Monodelphis     ---------------R---- ---V-------SE------- ---S------T--L--M---


                       130       140        150       160        170       180 
Human           --T--------L--S----E T----I-P------------ -E---S-Y------------ 
Chimpanzee      --T--------L--S----E T----I-P------------ -E---S-Y------------
Rhesus monkey   --T--------L--S----E T----I-P--T--------- -E---S-Y------------ 
Baboon          --T--------L--S----E T----I-P--T-----G--- -E---S-Y------------ 
Marmoset        --S--------L-LS----E TR--A--------------- -E-----Y------------   
SlowLoris       -------------------R -R------------A----- --------------------
Horse           ---R-------------Q-R -------------------- -------------------- 
Pig             -------------------- -------------------- --T----------------- 
Camel           -------------------- V----I-------------- --T----------------- 
Sheep           -E---------M-F---I-- A--T-P-P---------TK- --A-HS-------------S 
Goat            -E---------M-L---I-- A--T-P-P---------TK- -EA-HS-------------S 
Ox              -E---------M-F---I-- A--T-P-P---------TK- --A-YS-------------S 
Fin whale       -------------------- V------------------- --T----------------- 
Sei whale       -E------------------ V------------------- --T------D---------- 
Elephant        -E-Q-----I----D----- A---KA-----------TT- --A--------FR------- 
Dog             ---R---------------- -R------------------ --T-----------------
Cat             ---R----------H----- VR------------------ -------------------- 
Mink            ---R---------------- VR-----------------e -------------------- 
Rabbit          ---R---------------- -----I-------------- --A----------------- 
Hamster         ---------I---L--AY-E A-G--I-----QF----GV- -E--DL-I--KVR------- 
Rat             ---------I---IS-AY-E A-G--I-L---Q-----GV- -E-KDL----NIR------- 
Mouse           ---------I---IS-AY-E A-G-GI-F---Q-----GV- -E-KILSLR-TIR------- 

a.p.m.          EQNKRLLEGMEKIVGQVHPG IKENEVYSVWSGLPSLQMAD EDSRLFAFYNLLHCLRRDSH 

BrTailPossum    -------------------- DR------------------ --T----------------- 
Monodelphis     -------------------- DR------------------ --T----------------- 


                       190      199      diffs from a.p.m.
Human           --------------HNN--             34
Chimpanzee      --------------HNN--             34
Rhesus monkey   --------------HNN--             37
Baboon          --------------HNN--             38
Marmoset        --------------H-N--             32
SlowLoris       -------------------              7
Horse           -------------V-----              9
Pig             -------------------              4
Camel           -------------------              6
Sheep           ---T-----N-----NN--             40
Goat            ---T-----N-----NN--             41
Ox              ---T-----N-----NN--             39
Fin whale       -------------------              8
Sei whale       ---S-----------N---             14
Elephant        ---S---------V-NN--             53
Dog             -------------V-----              5
Cat             ---S---------V-----             11
Mink            -------------V-h---              
Rabbit          -------------------              9
Hamster         -V-------R--VVHNN--             69
Rat             -V-----F-R-Q-VHKN--             71
Mouse           -V-----V-R-Q-AHQN--             75

a.p.m.          KIDNYLKLLKCRIIYDSNC

BrTailPossum    ------------L-H----             13
Monodelphis     ------------L-H----             18

Return to list of Alignments

Home


Last update 13 March 2008